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1.
J Biosci ; 2007 Jun; 32(4): 705-12
Article in English | IMSEAR | ID: sea-110770

ABSTRACT

A cDNA coding for the C-terminus of spider flagelliform silk protein (AvFlag) was cloned from Araneus ventricosus. Analysis of the cDNA sequence shows that the C-terminus of AvFlag consists of 167 amino acids of a repetitive region and 87 amino acids of a C-terminal non-repetitive region. The peptide motifs found in spider flagelliform silk proteins, GPGGX and GGX,were conserved in the repetitive region of AvFlag. Phylogenetic analysis further confirmed that AvFlag belongs to the spider flagelliform silk proteins. The AvFlag cDNA was expressed as a 28 kDa polypeptide in baculovirus-infected insect cells. As a new expression approach for spider silk protein,the combination of polyhedrin and AvFlag creates a polyhedrin AvFlag fusion protein (61 kDa) that is produced as recombinant polyhedra; this provides a basis for the source of spider silk proteins for various applications.


Subject(s)
Amino Acid Sequence , Animals , Baculoviridae/genetics , Base Sequence , Blotting, Western , Cloning, Molecular , DNA, Complementary , Electrophoresis, Polyacrylamide Gel , Insect Proteins/chemistry , Molecular Sequence Data , Phylogeny , Sequence Homology, Amino Acid , Silk/chemistry , Spiders
2.
J Biosci ; 2006 Sep; 31(3): 329-38
Article in English | IMSEAR | ID: sea-110906

ABSTRACT

A local strain of Helicoverpa assulta nucleopolyhedrovirus (HasNPV) was isolated from infected H.assulta larvae in Korea. Restriction endonuclease fragment analysis, using 4 restriction enzymes, estimated that the total genome size of HasNPV is about 138 kb. A degenerate polymerase chain reaction (PCR) primer set for the polyhedrin gene successfully amplified the partial polyhedrin gene of HasNPV. The sequencing results showed that the about 430 bp PCR product was a fragment of the corresponding polyhedrin gene. Using HasNPV partial predicted polyhedrin to probe the Southern blots, we identified the location of the polyhedrin gene within the 6 kb Eco RI, 15 kb Nco I, 20 kb Xho I, 17 kb Bgl II and 3 kb Cla I fragments, respectively. The 3 kb Cla I fragment was cloned and the nucleotide sequences of the polyhedrin coding region and its flaking regions were determined. Nucleotide sequence analysis indicated the presence of an open reading frame of 735 nucleotides which could encode 245 amino acids with a predicted molecular mass of 29 kDa. The nucleotide sequences within the coding region of HasNPV polyhedrin shared 73.7% identity with the polyhedrin gene from Autographa californica NPV but were most closely related to Helicoverpa and Heliothis species NPVs with over 99% sequence identity.


Subject(s)
Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Genome, Viral , Molecular Sequence Data , Nucleopolyhedroviruses/genetics , Phylogeny , Polymerase Chain Reaction , Restriction Mapping , Sequence Analysis, DNA , Viral Proteins/classification , Viral Structural Proteins
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